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ABCG1 ABC-2 type transporter family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818520, updated on 18-Sep-2024

Summary

Official Symbol
ABCG1
Official Full Name
ABC-2 type transporter family protein
Primary source
TAIR:AT2G39350
Locus tag
AT2G39350
See related
Araport:AT2G39350
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATP-binding cassette G1; T16B24.1; T16B24_1
Summary
Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).
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Genomic context

See ABCG1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (16430085..16432751, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene jacalin-related lectin 23 Neighboring gene SAC3/GANP/Nin1/mts3/eIF-3 p25 family Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene F-box/associated interaction domain protein Neighboring gene Protein kinase superfamily protein

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_129492.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 
enables ATPase-coupled transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
ABC-2 type transporter family protein
NP_181467.1
  • ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G55090.1); Has 383683 Blast hits to 350637 proteins in 4113 species: Archae - 6942; Bacteria - 305769; Metazoa - 8575; Fungi - 6049; Plants - 5390; Viruses - 9; Other Eukaryotes - 50949 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    16430085..16432751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129492.3NP_181467.1  ABC-2 type transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181467.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80946
    UniProtKB/TrEMBL
    A0A178W2Z8, A0A5S9X5D2, A0A654F5I5
    Conserved Domains (1) summary
    TIGR00955
    Location:106739
    3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein