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SAC3A SAC3/GANP/Nin1/mts3/eIF-3 p25 family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818519, updated on 18-Sep-2024

Summary

Official Symbol
SAC3A
Official Full Name
SAC3/GANP/Nin1/mts3/eIF-3 p25 family
Primary source
TAIR:AT2G39340
Locus tag
AT2G39340
See related
Araport:AT2G39340
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtSAC3A; T16B24.2; T16B24_2; yeast Sac3 homolog A
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Genomic context

See SAC3A in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Sequence:
Chromosome: 2; NC_003071.7 (16423541..16430108)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Cysteine proteinases superfamily protein Neighboring gene jacalin-related lectin 23 Neighboring gene ncRNA Neighboring gene ABC-2 type transporter family protein Neighboring gene ncRNA Neighboring gene F-box/associated interaction domain protein Neighboring gene Protein kinase superfamily protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_129491.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within RNA splicing IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within alternative mRNA splicing, via spliceosome IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
SAC3/GANP/Nin1/mts3/eIF-3 p25 family
NP_181466.2
  • SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    16423541..16430108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129491.5NP_181466.2  SAC3/GANP/Nin1/mts3/eIF-3 p25 family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181466.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IUY8, O80947, Q56W50
    UniProtKB/TrEMBL
    A0A654FAT3
    Conserved Domains (1) summary
    pfam03399
    Location:739932
    SAC3_GANP; SAC3/GANP/Nin1/mts3/eIF-3 p25 family