U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cytochrome C oxidase subunit [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818460, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
cytochrome C oxidase subunit
Primary source
TAIR:AT2G38780
Locus tag
AT2G38780
See related
Araport:AT2G38780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T6A23.2; T6A23_2
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (16210816..16215521)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene annexin 3 Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene uncharacterized protein Neighboring gene Plant calmodulin-binding protein-like protein Neighboring gene histone H2A 8

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_129435.7

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
cytochrome C oxidase subunit
NP_181412.2
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    16210816..16215521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001336730.1 → NP_001324243.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZK2, Q56YJ0

  2. NM_001336731.1 → NP_001324253.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZJ3, Q56YJ0

  3. NM_001336732.1 → NP_001324248.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZJ2, A0A654F1F9

  4. NM_001336735.1 → NP_001324245.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZJ3, Q56YJ0

  5. NM_001336733.1 → NP_001324247.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZI1, Q56YJ0

  6. NM_001336734.1 → NP_001324246.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZJ4, A0A654F1F9

  7. NM_001336736.1 → NP_001324252.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZJ3, Q56YJ0

  8. NM_001336737.1 → NP_001324244.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZJ3, Q56YJ0

  9. NM_001336726.1 → NP_001324251.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZI4, Q56YJ0

  10. NM_001336727.1 → NP_001324250.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZJ3, Q56YJ0

  11. NM_001336729.1 → NP_001324242.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZI2, Q56YJ0

  12. NM_001336728.1 → NP_001324249.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZI3, Q56YJ0

  13. NM_129435.7 → NP_181412.2  cytochrome C oxidase subunit [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181412.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9X5B1, F4ITX5
    Conserved Domains (2) summary
    sd00006
    Location:344 → 374
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:314 → 373
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.