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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818439, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT2G38570
Locus tag
AT2G38570
See related
Araport:AT2G38570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T6A23.23; T6A23_23
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Sequence:
Chromosome: 2; NC_003071.7 (16136689..16138886, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene lipid transfer protein 1 Neighboring gene Transmembrane proteins 14C Neighboring gene transcript elongation factor IIS Neighboring gene Mitochondrial ATP synthase D chain-related protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene ncRNA Neighboring gene HAD superfamily, subfamily IIIB acid phosphatase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_001336706.1
NM_129414.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_181391.4
  • CONTAINS InterPro DOMAIN/s: PRC-barrel-like (InterPro:IPR011033); Has 300 Blast hits to 300 proteins in 81 species: Archae - 0; Bacteria - 135; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    16136689..16138886 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129414.5 → NP_181391.4  uncharacterized protein AT2G38570 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181391.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VTH1, F4IT02
    Conserved Domains (1) summary
    cl21591
    Location:193 → 278
    PRCH; Photosynthetic reaction center (RC) complex, subunit H; RC is an integral membrane protein-pigment complex which catalyzes light-induced reduction of ubiquinone to ubiquinol, generating a transmembrane electrochemical gradient of protons used to produce ...

  2. NM_001336706.1 → NP_001324301.1  uncharacterized protein AT2G38570 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZQ0
Nucleotide Protein
Heading Accession and Version

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