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ribosome biogenesis regulatory protein (RRS1) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818377, updated on 18-Sep-2024

Summary

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Official Full Name
ribosome biogenesis regulatory protein (RRS1) family protein
Primary source
TAIR:AT2G37990
Locus tag
AT2G37990
See related
Araport:AT2G37990
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T8P21.10; T8P21_10
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Sequence:
Chromosome: 2; NC_003071.7 (15900635..15903218)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Yos1-like protein Neighboring gene O-fucosyltransferase family protein Neighboring gene chaperone protein dnaJ-like protein Neighboring gene Neutral/alkaline non-lysosomal ceramidase Neighboring gene vacuoleless1 (VCL1) Neighboring gene Cysteine proteinases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. Pendle AF, et al. Mol Biol Cell, 2005 Jan. PMID 15496452, Free PMC Article
  2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_129356.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleolus HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ribosome biogenesis regulatory protein (RRS1) family protein
NP_565878.1
  • ribosome biogenesis regulatory protein (RRS1) family protein; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis regulatory protein (InterPro:IPR007023); Has 425 Blast hits to 423 proteins in 207 species: Archae - 1; Bacteria - 2; Metazoa - 151; Fungi - 137; Plants - 58; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    15900635..15903218
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129356.3 → NP_565878.1  ribosome biogenesis regulatory protein (RRS1) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565878.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q56WN3, Q8LA50, Q9SH88
    UniProtKB/TrEMBL
    A0A5S9X4Y7, A0A654F179, A0A7G2EF67, Q0WWN4
    Conserved Domains (1) summary
    pfam04939
    Location:11 → 173
    RRS1; Ribosome biogenesis regulatory protein (RRS1)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SH88.2

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