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Ribosomal protein L36e family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818337, updated on 18-Sep-2024

Summary

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Official Full Name
Ribosomal protein L36e family protein
Primary source
TAIR:AT2G37600
Locus tag
AT2G37600
See related
Araport:AT2G37600
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F13M22.10; F13M22_10
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Sequence:
Chromosome: 2; NC_003071.7 (15774030..15775374, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene DNA binding with one finger 2.4 Neighboring gene uncharacterized protein Neighboring gene actin 1 Neighboring gene myb-like HTH transcriptional regulator family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Carroll AJ, et al. Mol Cell Proteomics, 2008 Feb. PMID 17934214
  2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

NM_001084548.1
NM_129316.4

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
part_of cytosolic large ribosomal subunit HDA PubMed 
located_in endoplasmic reticulum HDA PubMed 

General protein information

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Preferred Names
Ribosomal protein L36e family protein
NP_001078017.1
  • Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 756 Blast hits to 755 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink).
NP_181296.1
  • Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 755 Blast hits to 754 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 139; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    15774030..15775374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129316.4 → NP_181296.1  Ribosomal protein L36e family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181296.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80929
    UniProtKB/TrEMBL
    A0A5S9X4U2, A0A654EZS7, A0A7G2EIC5
    Conserved Domains (1) summary
    pfam01158
    Location:7 → 101
    Ribosomal_L36e; Ribosomal protein L36e

  2. NM_001084548.1 → NP_001078017.1  Ribosomal protein L36e family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078017.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80929
    UniProtKB/TrEMBL
    A0A5S9X4U2, A0A654EZS7, A0A7G2EIC5
    Conserved Domains (1) summary
    pfam01158
    Location:7 → 101
    Ribosomal_L36e; Ribosomal protein L36e
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O80929.1

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