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DNAse I-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818321, updated on 18-Sep-2024

Summary

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Official Full Name
DNAse I-like superfamily protein
Primary source
TAIR:AT2G37440
Locus tag
AT2G37440
See related
Araport:AT2G37440
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3G5.23; F3G5_23
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Genomic context

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Location:
chromosome: 2
Exon count:
11
Sequence:
Chromosome: 2; NC_003071.7 (15718044..15722152)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene C2H2 and C2HC zinc fingers superfamily protein Neighboring gene Cystatin/monellin superfamily protein Neighboring gene nodulin MtN21 /EamA-like transporter family protein Neighboring gene nodulin MtN21 /EamA-like transporter family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001336660.1
NM_129299.4
NM_201893.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables inositol-polyphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
DNAse I-like superfamily protein
NP_181280.3
  • DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G01900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_973622.1
  • DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    15718044..15722152
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129299.4 → NP_181280.3  DNAse I-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181280.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WT19, Q9ZUS3
    UniProtKB/TrEMBL
    A0A178VVC7, A0A5S9X4T5
    Conserved Domains (1) summary
    cl00490
    Location:6 → 424
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily

  2. NM_001336660.1 → NP_001323804.1  DNAse I-like superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WT19, Q9ZUS3
    UniProtKB/TrEMBL
    A0A178VVC7, A0A5S9X4T5
    Conserved Domains (1) summary
    cl00490
    Location:6 → 424
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily

  3. NM_201893.2 → NP_973622.1  DNAse I-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973622.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IQW9
    Conserved Domains (1) summary
    cl00490
    Location:3 → 343
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0WT19.1

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