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NAP12 non-intrinsic ABC protein 12 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818275, updated on 18-Sep-2024

Summary

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Official Symbol
NAP12
Official Full Name
non-intrinsic ABC protein 12
Primary source
TAIR:AT2G37010
Locus tag
AT2G37010
See related
Araport:AT2G37010
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATNAP12; non-intrinsic ABC protein 12; T1J8.19; T1J8_19
Summary
member of NAP subfamily
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Genomic context

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See NAP12 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Sequence:
Chromosome: 2; NC_003071.7 (15541389..15546285)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RNApolymerase sigma-subunit F Neighboring gene TCP family transcription factor Neighboring gene Translin family protein Neighboring gene TRF-like 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Arabidopsis thaliana ABC protein superfamily, a complete inventory. Sánchez-Fernández R, et al. J Biol Chem, 2001 Aug 10. PMID 11346655
  2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_001336618.1
NM_129257.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
non-intrinsic ABC protein 12
NP_181238.4
  • non-intrinsic ABC protein 12 (NAP12); FUNCTIONS IN: transporter activity; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G60740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    15541389..15546285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129257.4 → NP_181238.4  non-intrinsic ABC protein 12 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181238.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IPY4, Q9SJK6
    UniProtKB/TrEMBL
    A0A178VZC4
    Conserved Domains (3) summary
    cd03213
    Location:482 → 708
    ABCG_EPDR; Eye pigment and drug resistance transporter subfamily G of the ATP-binding cassette superfamily
    TIGR00955
    Location:498 → 1076
    3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein
    pfam15719
    Location:303 → 416
    DUF4674; Domain of unknown function (DUF4674)

  2. NM_001336618.1 → NP_001323430.1  non-intrinsic ABC protein 12 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IPY4, Q9SJK6
    UniProtKB/TrEMBL
    A0A178VZC4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SJK6.3

Gene LinkOut

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