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A20/AN1-like zinc finger family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818205, updated on 18-Sep-2024

Summary

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Official Full Name
A20/AN1-like zinc finger family protein
Primary source
TAIR:AT2G36320
Locus tag
AT2G36320
See related
Araport:AT2G36320
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2H17.7; F2H17_7
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (15228714..15230663)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uridine-ribohydrolase 1 Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene DNA-binding storekeeper protein-related transcriptional regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_129189.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
A20/AN1-like zinc finger family protein
NP_565844.1
  • A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT3G52800.1); Has 1065 Blast hits to 1046 proteins in 150 species: Archae - 2; Bacteria - 0; Metazoa - 450; Fungi - 9; Plants - 480; Viruses - 6; Other Eukaryotes - 118 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    15228714..15230663
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129189.5 → NP_565844.1  A20/AN1-like zinc finger family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565844.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0IGN9, Q9SJM6
    UniProtKB/TrEMBL
    A0A178VUK8, A0A5S9X4F4, A0A654F9Z5
    Conserved Domains (2) summary
    smart00154
    Location:102 → 139
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:14 → 36
    zf-A20; A20-like zinc finger
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SJM6.1

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