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HVA22J HVA22-like protein J [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818175, updated on 18-Sep-2024

Summary

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Official Symbol
HVA22J
Official Full Name
HVA22-like protein J
Primary source
TAIR:AT2G36020
Locus tag
AT2G36020
See related
Araport:AT2G36020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F11F19.7; F11F19_7; HVA22-like protein J
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Genomic context

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See HVA22J in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Sequence:
Chromosome: 2; NC_003071.7 (15123120..15125588, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Putative lysine decarboxylase family protein Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene E2F transcription factor 3 Neighboring gene Ovate family protein Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_129161.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
HVA22-like protein J
NP_565832.1
  • HVA22-like protein J (HVA22J); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: Abscisic acid-responsive (TB2/DP1, HVA22) family protein (TAIR:AT5G42560.1); Has 1423 Blast hits to 1423 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 697; Fungi - 144; Plants - 486; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    15123120..15125588 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129161.3 → NP_565832.1  HVA22-like protein J [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565832.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GXE9, Q8LEZ1, Q9SJ48
    UniProtKB/TrEMBL
    A0A178VN77, A0A384LAQ8, A0MES1, Q1PEW5
    Conserved Domains (1) summary
    pfam03134
    Location:19 → 97
    TB2_DP1_HVA22; TB2/DP1, HVA22 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8GXE9.2

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