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Phosphoribosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818106, updated on 18-Sep-2024

Summary

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Official Full Name
Phosphoribosyltransferase family protein
Primary source
TAIR:AT2G35390
Locus tag
AT2G35390
See related
Araport:AT2G35390
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AT2G35400; T32F12.23; T32F12_23
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (14895248..14897882, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene RING/U-box superfamily protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Elrouby N, et al. Proc Natl Acad Sci U S A, 2010 Oct 5. PMID 20855607, Free PMC Article
  2. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
  3. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001036410.1
NM_129091.4
NM_179913.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables ribose phosphate diphosphokinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in ribonucleoside monophosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Phosphoribosyltransferase family protein
NP_001031487.1
  • Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_181082.1
  • Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 11485 Blast hits to 11226 proteins in 2803 species: Archae - 263; Bacteria - 6160; Metazoa - 635; Fungi - 723; Plants - 204; Viruses - 13; Other Eukaryotes - 3487 (source: NCBI BLink).
NP_850244.1
  • Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 11486 Blast hits to 11227 proteins in 2803 species: Archae - 263; Bacteria - 6160; Metazoa - 635; Fungi - 723; Plants - 205; Viruses - 13; Other Eukaryotes - 3487 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    14895248..14897882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001336555.1 → NP_001325018.1  Phosphoribosyltransferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYX1, A0A178WGP1
    Conserved Domains (1) summary
    PLN02369
    Location:51 → 352
    PLN02369; ribose-phosphate pyrophosphokinase

  2. NM_179913.3 → NP_850244.1  Phosphoribosyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850244.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q42581, Q67XL7, Q67YH7, Q84LR8, Q8GUH0
    UniProtKB/TrEMBL
    A0A178W087, A0A178WGP1, A0A5S9X4E3
    Conserved Domains (1) summary
    PLN02369
    Location:102 → 403
    PLN02369; ribose-phosphate pyrophosphokinase

  3. NM_129091.4 → NP_181082.1  Phosphoribosyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181082.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYX1, A0A178WGP1
    Conserved Domains (1) summary
    PLN02369
    Location:51 → 352
    PLN02369; ribose-phosphate pyrophosphokinase

  4. NM_001036410.1 → NP_001031487.1  Phosphoribosyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031487.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IJW3
    Conserved Domains (3) summary
    cd06223
    Location:252 → 343
    PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain
    PLN02369
    Location:102 → 343
    PLN02369; ribose-phosphate pyrophosphokinase
    pfam13793
    Location:93 → 209
    Pribosyltran_N; N-terminal domain of ribose phosphate pyrophosphokinase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q42581.2

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