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ubiquitin family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818103, updated on 18-Sep-2024

Summary

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Official Full Name
ubiquitin family protein
Primary source
TAIR:AT2G35360
Locus tag
AT2G35360
See related
Araport:AT2G35360
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T32F12.26; T32F12_26
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (14889048..14891004, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene poltergeist like 1 Neighboring gene glycine decarboxylase complex H Neighboring gene Peroxidase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_001336553.1
NM_001336554.1
NM_129088.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ubiquitin family protein
NP_181079.1
  • ubiquitin family protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Domain of unknown function SAYSvFN (InterPro:IPR019387); Has 81 Blast hits to 81 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    14889048..14891004 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129088.4 → NP_181079.1  ubiquitin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181079.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W039, O82301
    Conserved Domains (2) summary
    pfam10260
    Location:153 → 215
    SAYSvFN; Uncharacterized conserved domain (SAYSvFN)
    cl00155
    Location:18 → 96
    UBQ; Ubiquitin-like proteins

  2. NM_001336554.1 → NP_001323506.1  ubiquitin family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AX89

  3. NM_001336553.1 → NP_001323505.1  ubiquitin family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AX89
Nucleotide Protein
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