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CTP synthase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818054, updated on 18-Sep-2024

Summary

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Official Full Name
CTP synthase family protein
Primary source
TAIR:AT2G34890
Locus tag
AT2G34890
See related
Araport:AT2G34890
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F19I3.12; F19I3_12
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Genomic context

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Location:
chromosome: 2
Exon count:
17
Sequence:
Chromosome: 2; NC_003071.7 (14718195..14721271, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein Neighboring gene Transcription factor GTE6 Neighboring gene root hair specific protein Neighboring gene ncRNA Neighboring gene RING/U-box superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of filament-forming CTP synthases from Arabidopsis thaliana. Daumann M, et al. Plant J, 2018 Oct. PMID 30030857, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_129042.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables CTP synthase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in 'de novo' CTP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoophidium IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
CTP synthase family protein
NP_181035.1
  • CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT1G30820.1); Has 10859 Blast hits to 10821 proteins in 2916 species: Archae - 240; Bacteria - 5504; Metazoa - 258; Fungi - 230; Plants - 171; Viruses - 0; Other Eukaryotes - 4456 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    14718195..14721271 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129042.1 → NP_181035.1  CTP synthase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181035.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VU73, A0A5S9X453, O64753
    Conserved Domains (3) summary
    cd01746
    Location:298 → 543
    GATase1_CTP_Synthase; Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase
    PLN02327
    Location:1 → 557
    PLN02327; CTP synthase
    pfam06418
    Location:2 → 272
    CTP_synth_N; CTP synthase N-terminus
Nucleotide Protein
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