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MATE efflux family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817999, updated on 18-Sep-2024

Summary

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Official Full Name
MATE efflux family protein
Primary source
TAIR:AT2G34360
Locus tag
AT2G34360
See related
Araport:AT2G34360
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F13P17.20; F13P17_20
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Sequence:
Chromosome: 2; NC_003071.7 (14507294..14510342)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Major facilitator superfamily protein Neighboring gene ARM repeat superfamily protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene Putative adipose-regulatory protein (Seipin) Neighboring gene ncRNA Neighboring gene NOD26-like intrinsic protein 2;1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
  
enables xenobiotic transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in xenobiotic detoxification by transmembrane export across the plasma membrane IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
MATE efflux family protein
NP_180983.4
  • MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, inflorescence meristem; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52450.1); Has 9873 Blast hits to 9806 proteins in 1933 species: Archae - 266; Bacteria - 6928; Metazoa - 149; Fungi - 306; Plants - 1346; Viruses - 0; Other Eukaryotes - 878 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    14507294..14510342
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128988.5 → NP_180983.4  MATE efflux family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180983.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IHU9, O80785
    UniProtKB/TrEMBL
    A0A5S9X3V3
    Conserved Domains (2) summary
    cd13132
    Location:27 → 457
    MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family
    TIGR00797
    Location:37 → 372
    matE; putative efflux protein, MATE family

  2. NM_001336510.1 → NP_001324516.1  MATE efflux family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VQH7, A0A1P8B0B6, A0A654F9E9
    Conserved Domains (1) summary
    cd13132
    Location:27 → 415
    MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4IHU9.1

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