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Polynucleotidyl transferase, ribonuclease H-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817994, updated on 18-Sep-2024

Summary

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Official Full Name
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Primary source
TAIR:AT2G34320
Locus tag
AT2G34320
See related
Araport:AT2G34320
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F13P17.16; F13P17_16
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (14484959..14485837)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene avirulence induced family protein Neighboring gene avirulence induced family protein Neighboring gene uncharacterized protein Neighboring gene LOW protein: protein BOBBER-like protein Neighboring gene senescence regulator (Protein of unknown function, DUF584)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_128984.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables RNA-DNA hybrid ribonuclease activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
NP_180979.1
  • Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 752 Blast hits to 752 proteins in 29 species: Archae - 14; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 735; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    14484959..14485837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128984.1 → NP_180979.1  Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180979.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EYS5, A0MER7, O80781
    Conserved Domains (2) summary
    cd06222
    Location:147 → 267
    RNase_H_like; Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of spliceosomal protein Prp8
    pfam13966
    Location:1 → 35
    zf-RVT; zinc-binding in reverse transcriptase
Nucleotide Protein
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