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DHHC-type zinc finger family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817930, updated on 18-Sep-2024

Summary

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Official Full Name
DHHC-type zinc finger family protein
Primary source
TAIR:AT2G33640
Locus tag
AT2G33640
See related
Araport:AT2G33640
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F4P9.41; F4P9_41
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Genomic context

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Location:
chromosome: 2
Exon count:
10
Sequence:
Chromosome: 2; NC_003071.7 (14239180..14242420)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene AT hook motif DNA-binding family protein Neighboring gene ncRNA Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene tRNA-Asp Neighboring gene tRNA-Asp

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Both male and female gametogenesis require a fully functional protein S-acyl transferase 21 in Arabidopsis thaliana. Li Y, et al. Plant J, 2019 Nov. PMID 31369173
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_128924.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables S-acyltransferase activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables protein-cysteine S-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within double-strand break repair involved in meiotic recombination IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within protein palmitoylation IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
DHHC-type zinc finger family protein
NP_180922.2
  • DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G15080.1); Has 4820 Blast hits to 4679 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 2062; Fungi - 621; Plants - 835; Viruses - 0; Other Eukaryotes - 1302 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    14239180..14242420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128924.4 → NP_180922.2  DHHC-type zinc finger family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180922.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O22814, Q6DR03, Q8L8C4
    UniProtKB/TrEMBL
    A0A178VPS5, A0A5S9X3N8, A0A654EZX7
    Conserved Domains (1) summary
    pfam01529
    Location:145 → 277
    DHHC; DHHC palmitoyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6DR03.1

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