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Ubiquitin-associated (UBA) protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817863, updated on 18-Sep-2024

Summary

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Official Full Name
Ubiquitin-associated (UBA) protein
Primary source
TAIR:AT2G33010
Locus tag
AT2G33010
See related
Araport:AT2G33010
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T21L14.2
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (14010838..14013246)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene glycosyl hydrolase 9B8 Neighboring gene ubiquitin-associated (UBA)/TS-N domain-containing protein-like protein Neighboring gene receptor like protein 24 Neighboring gene receptor like protein 25

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_128861.2

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Ubiquitin-associated (UBA) protein
NP_180860.1
  • Ubiquitin-associated (UBA) protein; CONTAINS InterPro DOMAIN/s: UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein-related (TAIR:AT2G33000.1); Has 31 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 1; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    14010838..14013246
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128861.2 → NP_180860.1  Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180860.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VR76, O50062
    Conserved Domains (4) summary
    cd14273
    Location:14 → 38
    UBA_TAP-C_like; UBA-like domain found in the NXF family of mRNA nuclear export factors and similar proteins
    cd14352
    Location:429 → 464
    UBA_DCN1; UBA-like domain found in yeast defective in cullin neddylation protein 1 (DCN1) and similar proteins
    pfam14555
    Location:121 → 163
    UBA_4; UBA-like domain
    cl21463
    Location:333 → 367
    UBA_like_SF; UBA domain-like superfamily
Nucleotide Protein
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