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FRS2 FAR1-related sequence 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817785, updated on 18-Sep-2024

Summary

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Official Symbol
FRS2
Official Full Name
FAR1-related sequence 2
Primary source
TAIR:AT2G32250
Locus tag
AT2G32250
See related
Araport:AT2G32250
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
FAR1-related sequence 2; T32F6.23; T32F6_23
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Genomic context

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See FRS2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (13693094..13697206)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene early endosome antigen Neighboring gene phosphorylcholine cytidylyltransferase Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001084522.2
NM_001124959.2
NM_001336379.1
NM_001336380.1
NM_001336381.1
NM_001336382.1
NM_128784.4
NM_201851.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
FAR1-related sequence 2
NP_001077991.1
  • FAR1-related sequence 2 (FRS2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: far-red elongated hypocotyls 3 (TAIR:AT3G22170.2); Has 1417 Blast hits to 1282 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 75; Plants - 1337; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
NP_001118431.1
  • FAR1-related sequence 2 (FRS2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: far-red elongated hypocotyls 3 (TAIR:AT3G22170.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_180784.2
  • FAR1-related sequence 2 (FRS2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, SWIM-type (InterPro:IPR007527), MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564); BEST Arabidopsis thaliana protein match is: far-red elongated hypocotyls 3 (TAIR:AT3G22170.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_973580.1
  • FAR1-related sequence 2 (FRS2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: far-red elongated hypocotyls 3 (TAIR:AT3G22170.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13693094..13697206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001124959.2 → NP_001118431.1  FAR1-related sequence 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001118431.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EY36
    Conserved Domains (4) summary
    PLN03097
    Location:40 → 797
    FHY3; Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional
    pfam04434
    Location:499 → 535
    SWIM; SWIM zinc finger
    pfam03101
    Location:53 → 138
    FAR1; FAR1 DNA-binding domain
    pfam10551
    Location:228 → 315
    MULE; MULE transposase domain

  2. NM_128784.4 → NP_180784.2  FAR1-related sequence 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180784.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WQG7, Q3EBQ3, Q56Y20, Q9ZV55
    UniProtKB/TrEMBL
    A0A654EY36
    Conserved Domains (4) summary
    PLN03097
    Location:40 → 799
    FHY3; Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional
    pfam04434
    Location:499 → 535
    SWIM; SWIM zinc finger
    pfam03101
    Location:53 → 138
    FAR1; FAR1 DNA-binding domain
    pfam10551
    Location:228 → 315
    MULE; MULE transposase domain

  3. NM_001336380.1 → NP_001324564.1  FAR1-related sequence 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WQG7, Q3EBQ3, Q56Y20, Q9ZV55
    UniProtKB/TrEMBL
    A0A654EY36

  4. NM_001084522.2 → NP_001077991.1  FAR1-related sequence 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077991.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WQG7, Q3EBQ3, Q56Y20, Q9ZV55
    UniProtKB/TrEMBL
    A0A654EY36
    Conserved Domains (4) summary
    PLN03097
    Location:40 → 799
    FHY3; Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional
    pfam04434
    Location:499 → 535
    SWIM; SWIM zinc finger
    pfam03101
    Location:53 → 138
    FAR1; FAR1 DNA-binding domain
    pfam10551
    Location:228 → 315
    MULE; MULE transposase domain

  5. NM_001336379.1 → NP_001324563.1  FAR1-related sequence 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B0H6, A0A654EY36

  6. NM_001336381.1 → NP_001324561.1  FAR1-related sequence 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B0K4, A0A654EY36

  7. NM_001336382.1 → NP_001324562.1  FAR1-related sequence 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B0I3, A0A654EY36

  8. NM_201851.2 → NP_973580.1  FAR1-related sequence 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973580.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EY36
    Conserved Domains (4) summary
    PLN03097
    Location:40 → 797
    FHY3; Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional
    pfam04434
    Location:499 → 535
    SWIM; SWIM zinc finger
    pfam03101
    Location:53 → 138
    FAR1; FAR1 DNA-binding domain
    pfam10551
    Location:228 → 315
    MULE; MULE transposase domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3EBQ3.1

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