U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817739, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Ankyrin repeat family protein
Primary source
TAIR:AT2G31820
Locus tag
AT2G31820
See related
Araport:AT2G31820
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F20M17.14; F20M17_14
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (13529766..13533348)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene Integrin-linked protein kinase family Neighboring gene ACT domain-containing small subunit of acetolactate synthase protein Neighboring gene endonuclease/exonuclease/phosphatase family protein Neighboring gene Thioredoxin superfamily protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

NM_128740.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Ankyrin repeat family protein
NP_180741.1
  • Ankyrin repeat family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G05640.1); Has 69909 Blast hits to 28585 proteins in 1153 species: Archae - 97; Bacteria - 6878; Metazoa - 33005; Fungi - 7349; Plants - 5597; Viruses - 621; Other Eukaryotes - 16362 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13529766..13533348
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128740.2 → NP_180741.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180741.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYC8, A0A7G2EAK0, Q9SKB8
    Conserved Domains (4) summary
    PHA02736
    Location:360 → 418
    PHA02736; Viral ankyrin protein; Provisional
    sd00045
    Location:291 → 323
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:228 → 321
    Ank_2; Ankyrin repeats (3 copies)
    pfam13962
    Location:473 → 585
    PGG; Domain of unknown function
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools