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Integrin-linked protein kinase family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817737, updated on 18-Sep-2024

Summary

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Official Full Name
Integrin-linked protein kinase family
Primary source
TAIR:AT2G31800
Locus tag
AT2G31800
See related
Araport:AT2G31800
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F20M17.16; F20M17_16
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Genomic context

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Location:
chromosome: 2
Exon count:
12
Sequence:
Chromosome: 2; NC_003071.7 (13520325..13523918, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene ncRNA Neighboring gene ACT domain-containing small subunit of acetolactate synthase protein Neighboring gene Ankyrin repeat family protein Neighboring gene endonuclease/exonuclease/phosphatase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide analysis and experimentation of plant serine/ threonine/tyrosine-specific protein kinases. Rudrabhatla P, et al. Plant Mol Biol, 2006 Jan. PMID 16429265
  2. Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. Nemoto K, et al. Phytochemistry, 2011 Jul. PMID 21477822
  3. Interactomics of Qa-SNARE in Arabidopsis thaliana. Fujiwara M, et al. Plant Cell Physiol, 2014 Apr. PMID 24556609
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_128738.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein serine/threonine kinase activity HDA PubMed 
enables protein serine/threonine/tyrosine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within protein autophosphorylation HDA PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Integrin-linked protein kinase family
NP_180739.2
  • Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT2G43850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13520325..13523918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128738.4 → NP_180739.2  Integrin-linked protein kinase family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180739.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VT64, A0A654F8L8, Q1JPN7
    Conserved Domains (3) summary
    cd13999
    Location:201 → 454
    STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases
    sd00045
    Location:107 → 138
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:79 → 167
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
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