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Ribosomal protein S3 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817719, updated on 18-Sep-2024

Summary

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Official Full Name
Ribosomal protein S3 family protein
Primary source
TAIR:AT2G31610
Locus tag
AT2G31610
See related
Araport:AT2G31610
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T9H9.13; T9H9_13
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (13450241..13451982)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene INO80 complex subunit D-like protein Neighboring gene Receptor-like protein kinase-related family protein Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tandem affinity purification and mass spectrometric analysis of ubiquitylated proteins in Arabidopsis. Saracco SA, et al. Plant J, 2009 Jul. PMID 19292762, Free PMC Article
  2. High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Giavalisco P, et al. Plant Mol Biol, 2005 Mar. PMID 15821981
  3. Identification and dynamics of Arabidopsis adaptor protein-2 complex and its involvement in floral organ development. Yamaoka S, et al. Plant Cell, 2013 Aug. PMID 23975897, Free PMC Article
  4. Proteomic analysis of the 26S proteasome reveals its direct interaction with transit peptides of plastid protein precursors for their degradation. Sako K, et al. J Proteome Res, 2014 Jul 3. PMID 24846764
  5. Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Carroll AJ, et al. Mol Cell Proteomics, 2008 Feb. PMID 17934214

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_128718.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding HDA PubMed 
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
NOT located_in Golgi apparatus RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in chloroplast HDA PubMed 
located_in cytosolic ribosome HDA PubMed 
part_of cytosolic small ribosomal subunit HDA PubMed 
located_in peroxisome HDA PubMed 
located_in plant-type vacuole HDA PubMed 
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
Ribosomal protein S3 family protein
NP_180719.1
  • Ribosomal protein S3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, translation, response to abiotic stimulus; LOCATED IN: in 6 components; EXPRESSED IN: root, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), K Homology (InterPro:IPR004087), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, eukaryotic/archaeal (InterPro:IPR005703); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein (TAIR:AT5G35530.1); Has 6036 Blast hits to 6033 proteins in 2161 species: Archae - 256; Bacteria - 3766; Metazoa - 374; Fungi - 151; Plants - 165; Viruses - 0; Other Eukaryotes - 1324 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13450241..13451982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128718.5 → NP_180719.1  Ribosomal protein S3 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180719.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SIP7
    UniProtKB/TrEMBL
    A0A178VT49, A0A5S9X311, B9DHB0
    Conserved Domains (1) summary
    PTZ00084
    Location:3 → 220
    PTZ00084; 40S ribosomal protein S3; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SIP7.1

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