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HEMA3 Glutamyl-tRNA reductase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817682, updated on 18-Sep-2024

Summary

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Official Symbol
HEMA3
Official Full Name
Glutamyl-tRNA reductase family protein
Primary source
TAIR:AT2G31250
Locus tag
AT2G31250
See related
Araport:AT2G31250
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F16D14.9; F16D14_9
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Genomic context

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See HEMA3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (13319621..13321597, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ethylene-responsive element binding factor 15 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene autophagy 9 (APG9) Neighboring gene CDT1-like protein A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A second and differentially expressed glutamyl-tRNA reductase gene from Arabidopsis thaliana. Kumar AM, et al. Plant Mol Biol, 1996 Feb. PMID 8605295
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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NM_128681.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables NADP binding IEA
Inferred from Electronic Annotation
more info
  
enables glutamyl-tRNA reductase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in chlorophyll biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within porphyrin-containing compound biosynthetic process TAS
Traceable Author Statement
more info
 PubMed 
involved_in protoporphyrinogen IX biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Glutamyl-tRNA reductase family protein
NP_180683.1
  • HEMA3; FUNCTIONS IN: glutamyl-tRNA reductase activity, NADP or NADPH binding, binding, shikimate 5-dehydrogenase activity, catalytic activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site (InterPro:IPR018214), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal (InterPro:IPR015896), NAD(P)-binding domain (InterPro:IPR016040), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase (InterPro:IPR000343), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal (InterPro:IPR015895); BEST Arabidopsis thaliana protein match is: Glutamyl-tRNA reductase family protein (TAIR:AT1G09940.1); Has 4971 Blast hits to 4969 proteins in 1789 species: Archae - 225; Bacteria - 3606; Metazoa - 2; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 915 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13319621..13321597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128681.3 → NP_180683.1  Glutamyl-tRNA reductase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180683.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SJX1
    UniProtKB/TrEMBL
    A0A654EXS4
    Conserved Domains (3) summary
    cd05213
    Location:83 → 398
    NAD_bind_Glutamyl_tRNA_reduct; NADP-binding domain of glutamyl-tRNA reductase
    PLN00203
    Location:1 → 513
    PLN00203; glutamyl-tRNA reductase
    pfam00745
    Location:405 → 505
    GlutR_dimer; Glutamyl-tRNAGlu reductase, dimerization domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SJX1.1

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