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VSR2 VACUOLAR SORTING RECEPTOR 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817579, updated on 18-Sep-2024

Summary

Official Symbol
VSR2
Official Full Name
VACUOLAR SORTING RECEPTOR 2
Primary source
TAIR:AT2G30290
Locus tag
AT2G30290
See related
Araport:AT2G30290
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtVSR2; binding protein of 80 kDa 1;2; BP80-1;2; T9D9.10; T9D9_10; VACUOLAR SORTING RECEPTOR 1;2; VACUOLAR SORTING RECEPTOR 2; VSR1;2
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Genomic context

See VSR2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Sequence:
Chromosome: 2; NC_003071.7 (12912519..12915915, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene LURP-one-like protein (DUF567) Neighboring gene RNA-directed DNA methylation 4 Neighboring gene Major facilitator superfamily protein Neighboring gene GDSL-like Lipase/Acylhydrolase family protein

General gene information

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within protein targeting to vacuole TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IPI
Inferred from Physical Interaction
more info
PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
VACUOLAR SORTING RECEPTOR 2
NP_001189637.1
  • VACUOLAR SORTING RECEPTOR 2 (VSR2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), EGF-like calcium-binding (InterPro:IPR001881), Growth factor, receptor (InterPro:IPR009030); BEST Arabidopsis thaliana protein match is: vacuolar sorting receptor homolog 1 (TAIR:AT3G52850.1).
NP_180588.1
  • VACUOLAR SORTING RECEPTOR 2 (VSR2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), Growth factor, receptor (InterPro:IPR009030); BEST Arabidopsis thaliana protein match is: vacuolar sorting receptor homolog 1 (TAIR:AT3G52850.1); Has 9164 Blast hits to 4504 proteins in 203 species: Archae - 2; Bacteria - 77; Metazoa - 8165; Fungi - 0; Plants - 402; Viruses - 2; Other Eukaryotes - 516 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    12912519..12915915 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202708.1NP_001189637.1  VACUOLAR SORTING RECEPTOR 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189637.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VWV3, A0A5S9X2N7, F4IMR9
    Conserved Domains (2) summary
    smart00179
    Location:516544
    EGF_CA; Calcium-binding EGF-like domain
    cl10459
    Location:50177
    Peptidases_S8_S53; Peptidase domain in the S8 and S53 families
  2. NM_128582.2NP_180588.1  VACUOLAR SORTING RECEPTOR 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180588.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O22925, Q1PEY7
    UniProtKB/TrEMBL
    A0A178VWV3, A0A5S9X2N7
    Conserved Domains (2) summary
    smart00179
    Location:516544
    EGF_CA; Calcium-binding EGF-like domain
    cl10459
    Location:50177
    Peptidases_S8_S53; Peptidase domain in the S8 and S53 families