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PBCP Protein phosphatase 2C family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817569, updated on 18-Sep-2024

Summary

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Official Symbol
PBCP
Official Full Name
Protein phosphatase 2C family protein
Primary source
TAIR:AT2G30170
Locus tag
AT2G30170
See related
Araport:AT2G30170
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
PHOTOSYSTEM II CORE PHOSPHATASE; T27E13.9; T27E13_9
Summary
Encodes a chloroplast PP2C phosphatase that is required for efficient dephosphorylation of PSII proteins and involved in light acclimation.
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Genomic context

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See PBCP in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Sequence:
Chromosome: 2; NC_003071.7 (12879663..12881587, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene Mitochondrial substrate carrier family protein Neighboring gene tRNA-Gly Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AtPP2C62 and AtPP2C26 are suggested to be involved in both photosynthesis and suppression of the plant immune system.[AtPP2C26]
    Title: Loss of chloroplast-localized protein phosphatase 2Cs in Arabidopsis thaliana leads to enhancement of plant immunity and resistance to Xanthomonas campestris pv. campestris infection.
  2. Dephosphorylation of PSII subunits is required for efficient D1 degradation.
    Title: Significance of the photosystem II core phosphatase PBCP for plant viability and protein repair in thylakoid membranes.
  3. Photosystem II core phosphatase(PBCP) is required for efficient dephosphorylation of photosystem II proteins [PHOTOSYSTEM II CORE PHOSPHATASE] [PBCP]
    Title: Identification of a photosystem II phosphatase involved in light acclimation in Arabidopsis.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001336244.1
NM_001336245.1
NM_001336246.1
NM_001336247.1
NM_001336248.1
NM_128572.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables myosin phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to light stimulus IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within peptidyl-threonine dephosphorylation IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within thylakoid membrane organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast stroma HDA PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Protein phosphatase 2C family protein
NP_001318317.1
  • Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 893 Blast hits to 891 proteins in 246 species: Archae - 2; Bacteria - 86; Metazoa - 181; Fungi - 226; Plants - 226; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink).
NP_565696.1
  • Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G16580.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    12879663..12881587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001084511.3 → NP_001077980.1  Protein phosphatase 2C family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077980.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O64730
    Conserved Domains (1) summary
    smart00332
    Location:1 → 174
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain

  2. NM_128572.5 → NP_565696.1  Protein phosphatase 2C family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565696.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A8MQM8, O64730, Q94K51
    UniProtKB/TrEMBL
    A0A178VWE2, A0A5S9X2N8, A0A7G2EDD1
    Conserved Domains (1) summary
    smart00332
    Location:39 → 251
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain

  3. NM_001336246.1 → NP_001323769.1  Protein phosphatase 2C family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AY65

  4. NM_001336245.1 → NP_001323768.1  Protein phosphatase 2C family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AY09

  5. NM_001336248.1 → NP_001323771.1  Protein phosphatase 2C family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AY61

  6. NM_001336247.1 → NP_001323770.1  Protein phosphatase 2C family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AY07

  7. NM_001336244.1 → NP_001318317.1  Protein phosphatase 2C family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A2H1ZE30
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O64730.2

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