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TBL45 TRICHOME BIREFRINGENCE-LIKE 45 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817552, updated on 18-Sep-2024

Summary

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Official Symbol
TBL45
Official Full Name
TRICHOME BIREFRINGENCE-LIKE 45
Primary source
TAIR:AT2G30010
Locus tag
AT2G30010
See related
Araport:AT2G30010
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F23F1.7; F23F1_7; TRICHOME BIREFRINGENCE-LIKE 45
Summary
Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
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Genomic context

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See TBL45 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (12805667..12809386)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene PSY3-like protein Neighboring gene PHF5-like protein Neighboring gene Protein phosphatase 2C family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_128556.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
TRICHOME BIREFRINGENCE-LIKE 45
NP_565692.1
  • TRICHOME BIREFRINGENCE-LIKE 45 (TBL45); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT5G58600.1); Has 1337 Blast hits to 1318 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1337; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    12805667..12809386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001336237.1 → NP_001324289.1  TRICHOME BIREFRINGENCE-LIKE 45 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZP4, A0A654EYX5, A0A7G2EG02

  2. NM_128556.3 → NP_565692.1  TRICHOME BIREFRINGENCE-LIKE 45 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565692.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80872
    UniProtKB/TrEMBL
    A0A5S9X2G6, A0A654EYX5, A0A7G2EG02
    Conserved Domains (1) summary
    PLN02629
    Location:16 → 398
    PLN02629; powdery mildew resistance 5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O80872.1

Gene LinkOut

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