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Myb/SANT-like DNA-binding domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817538, updated on 18-Sep-2024

Summary

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Official Full Name
Myb/SANT-like DNA-binding domain protein
Primary source
TAIR:AT2G29880
Locus tag
AT2G29880
See related
Araport:AT2G29880
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T27A16.36
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (12742536..12743749)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Aquaporin-like superfamily protein Neighboring gene villin-like 1 Neighboring gene Presenilin-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_128542.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Myb/SANT-like DNA-binding domain protein
NP_180549.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 260 Blast hits to 212 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 10; Plants - 240; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    12742536..12743749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128542.2 → NP_180549.1  Myb/SANT-like DNA-binding domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180549.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O82368, Q1PEY9
    UniProtKB/TrEMBL
    A0MEQ7
    Conserved Domains (1) summary
    pfam12776
    Location:21 → 118
    Myb_DNA-bind_3; Myb/SANT-like DNA-binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O82368.1

Gene LinkOut

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