U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RBL1 RHOMBOID-like 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817453, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
RBL1
Official Full Name
RHOMBOID-like 1
Primary source
TAIR:AT2G29050
Locus tag
AT2G29050
See related
Araport:AT2G29050
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATRBL1; RHOMBOID-like 1; T9I4.13; T9I4_13
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RBL1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Sequence:
Chromosome: 2; NC_003071.7 (12477966..12480374)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Exostosin family protein Neighboring gene low-molecular-weight cysteine-rich 62 Neighboring gene GRAS family transcription factor Neighboring gene GRAS family transcription factor

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. An Arabidopsis Rhomboid homolog is an intramembrane protease in plants. Kanaoka MM, et al. FEBS Lett, 2005 Oct 24. PMID 16223493
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

NM_001084504.1
NM_128462.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
RHOMBOID-like 1
NP_001077973.1
  • RHOMBOID-like 1 (RBL1); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 4 (TAIR:AT3G53780.2); Has 5724 Blast hits to 5720 proteins in 1694 species: Archae - 148; Bacteria - 3468; Metazoa - 523; Fungi - 153; Plants - 363; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink).
NP_180469.3
  • RHOMBOID-like 1 (RBL1); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 4 (TAIR:AT3G53780.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    12477966..12480374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128462.4 → NP_180469.3  RHOMBOID-like 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180469.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O81073, Q0WQX7, Q3C2H8
    UniProtKB/TrEMBL
    A0A178VZI3, A0A5S9X279, A0A654EYK0
    Conserved Domains (1) summary
    pfam01694
    Location:123 → 263
    Rhomboid; Rhomboid family

  2. NM_001084504.1 → NP_001077973.1  RHOMBOID-like 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077973.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WQX7
    Conserved Domains (1) summary
    pfam01694
    Location:124 → 291
    Rhomboid; Rhomboid family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0WQX7.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.