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SAND family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817387, updated on 18-Sep-2024

Summary

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Official Full Name
SAND family protein
Primary source
TAIR:AT2G28390
Locus tag
AT2G28390
See related
Araport:AT2G28390
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MON1; MONENSIN SENSITIVITY1; T1B3.9; T1B3_9
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Genomic context

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Location:
chromosome: 2
Exon count:
14
Sequence:
Chromosome: 2; NC_003071.7 (12139578..12143665, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene SIT4 phosphatase-associated family protein Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene dsRNA-binding protein 2 Neighboring gene ncRNA Neighboring gene senescence regulator (Protein of unknown function, DUF584)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Protein delivery to vacuole requires SAND protein-dependent Rab GTPase conversion for MVB-vacuole fusion. Singh MK, et al. Curr Biol, 2014 Jun 16. PMID 24881875
  2. MONENSIN SENSITIVITY1 (MON1)/CALCIUM CAFFEINE ZINC SENSITIVITY1 (CCZ1)-Mediated Rab7 Activation Regulates Tapetal Programmed Cell Death and Pollen Development. Cui Y, et al. Plant Physiol, 2017 Jan. PMID 27799422, Free PMC Article
  3. Activation of the Rab7 GTPase by the MON1-CCZ1 Complex Is Essential for PVC-to-Vacuole Trafficking and Plant Growth in Arabidopsis. Cui Y, et al. Plant Cell, 2014 May. PMID 24824487, Free PMC Article
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_128399.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in late endosome to vacuole transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in plant organ development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
  
involved_in vacuole organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
SAND family protein
NP_029426.1
  • SAND family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar fusion protein MON1 (InterPro:IPR004353); Has 753 Blast hits to 594 proteins in 226 species: Archae - 6; Bacteria - 38; Metazoa - 289; Fungi - 213; Plants - 47; Viruses - 3; Other Eukaryotes - 157 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    12139578..12143665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128399.4 → NP_029426.1  SAND family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_029426.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q680T1, Q93ZL8, Q9SKN1
    UniProtKB/TrEMBL
    A0A654F7M6
    Conserved Domains (1) summary
    pfam03164
    Location:179 → 602
    Mon1; Trafficking protein Mon1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SKN1.2

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