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Surfeit locus protein 6 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817321, updated on 18-Sep-2024

Summary

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Official Full Name
Surfeit locus protein 6
Primary source
TAIR:AT2G27750
Locus tag
AT2G27750
See related
Araport:AT2G27750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15K20.15; F15K20_15
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (11823916..11824461, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene copper ion binding protein Neighboring gene RAB6-interacting golgin (DUF662) Neighboring gene tRNAisopentenyltransferase 2 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Surfeit locus protein 6
NP_180343.1
  • Surfeit locus protein 6; CONTAINS InterPro DOMAIN/s: Surfeit locus 6 (InterPro:IPR007019); BEST Arabidopsis thaliana protein match is: Surfeit locus protein 6 (TAIR:AT5G05210.1); Has 646 Blast hits to 578 proteins in 173 species: Archae - 0; Bacteria - 6; Metazoa - 188; Fungi - 142; Plants - 65; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11823916..11824461 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128334.1 → NP_180343.1  Surfeit locus protein 6 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180343.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EWS3, Q9ZUX6
    Conserved Domains (1) summary
    pfam04935
    Location:42 → 175
    SURF6; Surfeit locus protein 6
Nucleotide Protein
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