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CYP94C1 cytochrome P450, family 94, subfamily C, polypeptide 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817315, updated on 18-Sep-2024

Summary

Official Symbol
CYP94C1
Official Full Name
cytochrome P450, family 94, subfamily C, polypeptide 1
Primary source
TAIR:AT2G27690
Locus tag
AT2G27690
See related
Araport:AT2G27690
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
''cytochrome P450; cytochrome P450; F15K20.21; F15K20_21; family 94; polypeptide 1; polypeptide 1''; subfamily C
Summary
Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.
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Genomic context

See CYP94C1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (11809279..11811280)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene hypothetical protein (Domain of unknown function DUF220) Neighboring gene NAD(P)-linked oxidoreductase superfamily protein Neighboring gene miscRNA Neighboring gene eukaryotic translation initiation factor 2 family protein / eIF-2 family protein

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

NM_128328.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables alkane 1-monooxygenase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within response to wounding IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular region ISM
Inferred from Sequence Model
more info
 
located_in intracellular membrane-bounded organelle IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
cytochrome P450, family 94, subfamily C, polypeptide 1
NP_180337.1
  • ''cytochrome P450, family 94, subfamily C, polypeptide 1'' (CYP94C1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 28009 Blast hits to 27927 proteins in 1460 species: Archae - 46; Bacteria - 2607; Metazoa - 10748; Fungi - 6059; Plants - 7560; Viruses - 3; Other Eukaryotes - 986 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11809279..11811280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128328.3NP_180337.1  cytochrome P450, family 94, subfamily C, polypeptide 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180337.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZUX1
    UniProtKB/TrEMBL
    A0A178VTT5, A0A5S9X230
    Conserved Domains (1) summary
    PLN02426
    Location:23495
    PLN02426; cytochrome P450, family 94, subfamily C protein