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BLH5 BEL1-like homeodomain 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817264, updated on 18-Sep-2024

Summary

Official Symbol
BLH5
Official Full Name
BEL1-like homeodomain 5
Primary source
TAIR:AT2G27220
Locus tag
AT2G27220
See related
Araport:AT2G27220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
BEL1-like homeodomain 5; T22O13.1; T22O13_1
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Genomic context

See BLH5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (11637106..11639809, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene BRI1 suppressor 1 (BSU1)-like 3 Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene transcription factor-like protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
BEL1-like homeodomain 5
NP_001189615.2
  • BEL1-like homeodomain 5 (BLH5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: embryo, leaf whorl, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 1 (TAIR:AT2G35940.3).
NP_001318297.1
  • BEL1-like homeodomain 5 (BLH5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: embryo, leaf whorl, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 1 (TAIR:AT2G35940.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11637106..11639809 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202686.2NP_001189615.2  BEL1-like homeodomain 5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9X1P6, F4IFQ2
  2. NM_001336110.1NP_001318297.1  BEL1-like homeodomain 5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C0SV62, Q4PSU3, Q8S897
    UniProtKB/TrEMBL
    A0A178VX84, A0A5S9X1P6
    Conserved Domains (2) summary
    smart00574
    Location:71196
    POX; domain associated with HOX domains
    pfam05920
    Location:246285
    Homeobox_KN; Homeobox KN domain
  3. NM_128280.3NP_180290.2  BEL1-like homeodomain 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180290.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C0SV62, Q4PSU3, Q8S897
    UniProtKB/TrEMBL
    A0A178VX84, A0A5S9X1P6
    Conserved Domains (2) summary
    smart00574
    Location:71196
    POX; domain associated with HOX domains
    pfam05920
    Location:246285
    Homeobox_KN; Homeobox KN domain