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P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817262, updated on 18-Sep-2024

Summary

Official Full Name
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Primary source
TAIR:AT2G27200
Locus tag
AT2G27200
See related
Araport:AT2G27200
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
LSG1-1; T22O13.3; T22O13_3; yeast Lsg1 orthologue 1
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Genomic context

Location:
chromosome: 2
Exon count:
6
Sequence:
Chromosome: 2; NC_003071.7 (11625157..11628290)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene purple acid phosphatase 12 Neighboring gene BRI1 suppressor 1 (BSU1)-like 3 Neighboring gene BEL1-like homeodomain 5

General gene information

NM_128278.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables GTPase activity  
Component Evidence Code Pubs
located_in cytosol PubMed 
located_in nucleus  

General protein information

Preferred Names
P-loop containing nucleoside triphosphate hydrolases superfamily protein
NP_180288.1
  • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G08410.1); Has 7321 Blast hits to 7198 proteins in 1972 species: Archae - 116; Bacteria - 4700; Metazoa - 639; Fungi - 504; Plants - 290; Viruses - 0; Other Eukaryotes - 1072 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11625157..11628290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128278.3 → NP_180288.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180288.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SHS8
    UniProtKB/TrEMBL
    A0A178VYZ8, A0A654EY55
    Conserved Domains (2) summary
    cd01857
    Location:157 → 362
    HSR1_MMR1; A circularly permuted subfamily of the Ras GTPases
    COG1161
    Location:142 → 482
    RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]
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