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Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817210, updated on 18-Sep-2024

Summary

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Official Full Name
Major facilitator superfamily protein
Primary source
TAIR:AT2G26690
Locus tag
AT2G26690
See related
Araport:AT2G26690
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtNPF6.2; F18A8.6; F18A8_6; NPF6.2; NRT1/ PTR family 6.2
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Sequence:
Chromosome: 2; NC_003071.7 (11347147..11350993, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Plant heme oxygenase (decyclizing) family protein Neighboring gene FkbM family methyltransferase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression profiling reveals COI1 to be a key regulator of genes involved in wound- and methyl jasmonate-induced secondary metabolism, defence, and hormone interactions. Devoto A, et al. Plant Mol Biol, 2005 Jul. PMID 16021335
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_001336079.1
NM_001336080.1
NM_179753.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in oligopeptide transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within response to jasmonic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to wounding IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Major facilitator superfamily protein
NP_850084.1
  • Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: response to jasmonic acid stimulus, response to wounding; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.1 (TAIR:AT1G12110.1); Has 7265 Blast hits to 7134 proteins in 1412 species: Archae - 0; Bacteria - 3658; Metazoa - 494; Fungi - 438; Plants - 2171; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11347147..11350993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_179753.1 → NP_850084.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850084.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O48784, Q8LPH1, Q9SZY4
    UniProtKB/TrEMBL
    A0A178W0K8, A0A5S9X1M6
    Conserved Domains (2) summary
    COG3104
    Location:30 → 555
    PTR2; Dipeptide/tripeptide permease [Amino acid transport and metabolism]
    pfam00854
    Location:96 → 521
    PTR2; POT family

  2. NM_001336079.1 → NP_001324098.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZ04, A0A654EWF1

  3. NM_001336080.1 → NP_001324099.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZ62, A0A654EWF1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SZY4.1

Gene LinkOut

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