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zinc finger FYVE domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817114, updated on 18-Sep-2024

Summary

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Official Full Name
zinc finger FYVE domain protein
Primary source
TAIR:AT2G25730
Locus tag
AT2G25730
See related
Araport:AT2G25730
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3N11.1; F3N11_1
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Genomic context

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Location:
chromosome: 2
Exon count:
36
Sequence:
Chromosome: 2; NC_003071.7 (10956263..10972951, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene holocarboxylase synthase 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Sulfite exporter TauE/SafE family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
  2. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
  3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001202673.2
NM_001336017.1
NM_001336018.1
NM_128132.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
zinc finger FYVE domain protein
NP_001189602.1
  • unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages.
NP_565607.1
  • unknown protein; Has 157 Blast hits to 144 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10956263..10972951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202673.2 → NP_001189602.1  zinc finger FYVE domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189602.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYK1, A0A5S9X165, F4ISN0

  2. NM_001336017.1 → NP_001324903.1  zinc finger FYVE domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYK1, A0A5S9X165, F4ISN0

  3. NM_128132.1 → NP_565607.1  zinc finger FYVE domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565607.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYK1, A0A5S9X165, Q9SL90

  4. NM_001336018.1 → NP_001324902.1  zinc finger FYVE domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYK1, A0A1P8B1I9, A0A5S9X165, A0A654EW49
Nucleotide Protein
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