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epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817081, updated on 18-Sep-2024

Summary

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Official Full Name
epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein
Primary source
TAIR:AT2G25430
Locus tag
AT2G25430
See related
Araport:AT2G25430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F13B15.9; F13B15_9
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (10822192..10824939)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene uncharacterized protein Neighboring gene transducin family protein / WD-40 repeat family protein Neighboring gene receptor like protein 20 Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
  2. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_128100.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 1-phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
  
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in clathrin coat assembly IEA
Inferred from Electronic Annotation
more info
  
involved_in clathrin-dependent endocytosis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in vacuole HDA PubMed 

General protein information

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Preferred Names
epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein
NP_565595.1
  • epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G32285.2); Has 1786 Blast hits to 1328 proteins in 221 species: Archae - 4; Bacteria - 135; Metazoa - 673; Fungi - 126; Plants - 678; Viruses - 2; Other Eukaryotes - 168 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10822192..10824939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128100.4 → NP_565595.1  epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565595.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LF20, Q9SKK6
    UniProtKB/TrEMBL
    A0A178VVX2
    Conserved Domains (1) summary
    pfam07651
    Location:30 → 375
    ANTH; ANTH domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8LF20.2

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