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Peroxidase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817017, updated on 18-Sep-2024

Summary

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Official Full Name
Peroxidase superfamily protein
Primary source
TAIR:AT2G24800
Locus tag
AT2G24800
See related
Araport:AT2G24800
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F27C12.28; F27C12_28
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Sequence:
Chromosome: 2; NC_003071.7 (10571054..10572636, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene CONSTANS-like 3 Neighboring gene miscRNA Neighboring gene Pathogenesis-related thaumatin superfamily protein Neighboring gene translocon at the inner envelope membrane of chloroplasts 55-II Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of ubiquitinated proteins in Arabidopsis. Manzano C, et al. Plant Mol Biol, 2008 Sep. PMID 18535787
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001335963.1
NM_128039.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables lactoperoxidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Peroxidase superfamily protein
NP_180053.1
  • Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sperm cell, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G31760.1); Has 4841 Blast hits to 4814 proteins in 324 species: Archae - 0; Bacteria - 4; Metazoa - 10; Fungi - 415; Plants - 4336; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10571054..10572636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128039.2 → NP_180053.1  Peroxidase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180053.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SK52
    UniProtKB/TrEMBL
    A0A178W1Z7, A0A5S9X0W9, A0A7G2E8S6
    Conserved Domains (1) summary
    cd00693
    Location:30 → 328
    secretory_peroxidase; Horseradish peroxidase and related secretory plant peroxidases

  2. NM_001335963.1 → NP_001325148.1  Peroxidase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B2E5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SK52.1

Gene LinkOut

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