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HA5 plasma membrane H+-ATPase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816988, updated on 18-Sep-2024

Summary

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Official Symbol
HA5
Official Full Name
plasma membrane H+-ATPase
Primary source
TAIR:AT2G24520
Locus tag
AT2G24520
See related
Araport:AT2G24520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AHA5; F25P17.18; F25P17_18; H(+)-ATPase 5
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Genomic context

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See HA5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Sequence:
Chromosome: 2; NC_003071.7 (10414963..10420029)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene transcriptional regulator of RNA polII, SAGA, subunit Neighboring gene uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis Plasma Membrane ATPase AHA5 Is Negatively Involved in PAMP-Triggered Immunity. Zhao Z, et al. Int J Mol Sci, 2022 Mar 31. PMID 35409217, Free PMC Article
  2. Auxin Influx Carrier AUX1 Confers Acid Resistance for Arabidopsis Root Elongation Through the Regulation of Plasma Membrane H+-ATPase. Inoue SI, et al. Plant Cell Physiol, 2016 Oct. PMID 27503216, Free PMC Article
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Arabidopsis Plasma Membrane ATPase AHA5 Is Negatively Involved in PAMP-Triggered Immunity.
    Title: Arabidopsis Plasma Membrane ATPase AHA5 Is Negatively Involved in PAMP-Triggered Immunity.
  2. AUX1 positively regulates the plasma membrane H(+)-ATPase activity through maintenance of the auxin accumulation in root tips, and this process may serve to maintain root elongation especially under low pH conditions.
    Title: Auxin Influx Carrier AUX1 Confers Acid Resistance for Arabidopsis Root Elongation Through the Regulation of Plasma Membrane H+-ATPase.
Submit: New GeneRIF Correction

General gene information

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NM_001335933.1
NM_001335935.1
NM_128013.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables P-type proton-exporting transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in proton export across plasma membrane IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
plasma membrane H+-ATPase
NP_001318282.1
  • H(+)-ATPase 5 (HA5); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1); Has 37354 Blast hits to 32806 proteins in 3183 species: Archae - 691; Bacteria - 24060; Metazoa - 3886; Fungi - 2499; Plants - 1868; Viruses - 3; Other Eukaryotes - 4347 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10414963..10420029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001335934.1 → NP_001325336.1  plasma membrane H+-ATPase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IPQ2, Q9SJB3
    UniProtKB/TrEMBL
    A0A1P8B2Y6

  2. NM_001335933.1 → NP_001318282.1  plasma membrane H+-ATPase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IPQ2, Q9SJB3
    UniProtKB/TrEMBL
    A0A1P8B2U9

  3. NM_128013.2 → NP_180028.1  plasma membrane H+-ATPase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180028.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IPQ2, Q9SJB3
    UniProtKB/TrEMBL
    A0A1P8B2U9
    Conserved Domains (5) summary
    smart00831
    Location:1 → 65
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    COG4087
    Location:543 → 613
    COG4087; Soluble P-type ATPase [General function prediction only]
    TIGR01647
    Location:14 → 786
    ATPase-IIIA_H; plasma-membrane proton-efflux P-type ATPase
    pfam00122
    Location:79 → 300
    E1-E2_ATPase; E1-E2 ATPase
    pfam13246
    Location:354 → 415
    Cation_ATPase; Cation transport ATPase (P-type)

  4. NM_001335935.1 → NP_001325337.1  plasma membrane H+-ATPase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B2V0
Nucleotide Protein
Heading Accession and Version

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