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filament-like protein (DUF869) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816983, updated on 18-Sep-2024

Summary

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Official Full Name
filament-like protein (DUF869)
Primary source
TAIR:AT2G24470
Locus tag
AT2G24470
See related
Araport:AT2G24470
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T28I24.20; T28I24_20
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (10395828..10396622, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene C3HC4-type RING finger protein Neighboring gene ncRNA Neighboring gene Zinc finger, C3HC4 type (RING finger) family protein Neighboring gene replicon protein A2 Neighboring gene Zinc finger protein 622

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
filament-like protein (DUF869)
NP_180023.1
  • Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT4G36120.1); Has 55 Blast hits to 55 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10395828..10396622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128008.1 → NP_180023.1  filament-like protein (DUF869) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180023.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EVQ2, A0A7G2ECX1, Q9ZQ21
    Conserved Domains (1) summary
    pfam05911
    Location:19 → 91
    FPP; Filament-like plant protein, long coiled-coil
Nucleotide Protein
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