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scpl23 serine carboxypeptidase-like 23 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816935, updated on 18-Sep-2024

Summary

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Official Symbol
scpl23
Official Full Name
serine carboxypeptidase-like 23
Primary source
TAIR:AT2G24010
Locus tag
AT2G24010
See related
Araport:AT2G24010
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
serine carboxypeptidase-like 23; T29E15.21; T29E15_21
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Genomic context

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See scpl23 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Sequence:
Chromosome: 2; NC_003071.7 (10214574..10217739)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene early nodulin-like protein 11 Neighboring gene serine carboxypeptidase-like 22 Neighboring gene Putative BCR, YbaB family COG0718 Neighboring gene zinc ion binding / nucleic acid binding protein Neighboring gene Low temperature and salt responsive protein family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
serine carboxypeptidase-like 23
NP_001318279.1
  • serine carboxypeptidase-like 23 (scpl23); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 22 (TAIR:AT2G24000.1); Has 3412 Blast hits to 3335 proteins in 258 species: Archae - 0; Bacteria - 12; Metazoa - 650; Fungi - 841; Plants - 1598; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10214574..10217739
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127963.5 → NP_179979.5  serine carboxypeptidase-like 23 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B149

  2. NM_001335912.1 → NP_001318279.1  serine carboxypeptidase-like 23 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4INP1, O82229
    UniProtKB/TrEMBL
    A0A5S9X0L7
    Conserved Domains (1) summary
    pfam00450
    Location:35 → 447
    Peptidase_S10; Serine carboxypeptidase

  3. NM_001335913.1 → NP_001324770.1  serine carboxypeptidase-like 23 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B140

  4. NM_001335914.1 → NP_001324769.1  serine carboxypeptidase-like 23 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B146
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O82229.2

Gene LinkOut

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