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GDSL-like Lipase/Acylhydrolase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816886, updated on 18-Sep-2024

Summary

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Official Full Name
GDSL-like Lipase/Acylhydrolase superfamily protein
Primary source
TAIR:AT2G23540
Locus tag
AT2G23540
See related
Araport:AT2G23540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F26B6.19; F26B6_19
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (10024150..10026258)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene Zinc-finger domain of monoamine-oxidase A repressor R1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene methyl esterase 6 Neighboring gene methyl esterase 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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NM_127918.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
GDSL-like Lipase/Acylhydrolase superfamily protein
NP_179935.1
  • GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 3581 Blast hits to 3540 proteins in 243 species: Archae - 0; Bacteria - 373; Metazoa - 0; Fungi - 51; Plants - 3139; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10024150..10026258
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127918.4 → NP_179935.1  GDSL-like Lipase/Acylhydrolase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179935.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80470
    UniProtKB/TrEMBL
    A0A178VNJ6, A0A5S9X0V7, A0A7G2ECN3
    Conserved Domains (1) summary
    cd01837
    Location:48 → 372
    SGNH_plant_lipase_like; a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O80470.1

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