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SEP2 stress enhanced protein 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816733, updated on 18-Sep-2024

Summary

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Official Symbol
SEP2
Official Full Name
stress enhanced protein 2
Primary source
TAIR:AT2G21970
Locus tag
AT2G21970
See related
Araport:AT2G21970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F7D8.29; F7D8_29; stress enhanced protein 2
Summary
stress enhanced protein 2 (SEP2) chlorophyll a/b-binding protein
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Genomic context

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See SEP2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (9356983..9357967, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene shikimate kinase 1 Neighboring gene ncRNA Neighboring gene SKP1 interacting partner 6 Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene HAUS augmin-like complex subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_127766.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables chlorophyll binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to UV-A IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in cellular response to high light intensity IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within photosynthesis, light harvesting ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
involved_in response to wounding IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast thylakoid membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
stress enhanced protein 2
NP_565524.1
  • stress enhanced protein 2 (SEP2); Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    9356983..9357967 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127766.3 → NP_565524.1  stress enhanced protein 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565524.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q94F34, Q9SJ02
    UniProtKB/TrEMBL
    A0A178VQ84, A0A5S9X0F3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SJ02.1

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