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PE11 pectinesterase 11 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816699, updated on 18-Sep-2024

Summary

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Official Symbol
PE11
Official Full Name
pectinesterase 11
Primary source
TAIR:AT2G21610
Locus tag
AT2G21610
See related
Araport:AT2G21610
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
A. THALIANA PECTINESTERASE 11; ATPE11; F2G1.12; F2G1_12; pectinesterase 11
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Genomic context

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See PE11 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (9245038..9247052, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Glucose-1-phosphate adenylyltransferase family protein Neighboring gene uncharacterized protein Neighboring gene endoplasmatic reticulum retrieval protein 1B Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein Neighboring gene Sec23/Sec24 protein transport family protein Neighboring gene marker for oxidative stress response protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
  
involved_in pectin catabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
pectinesterase 11
NP_179755.1
  • pectinesterase 11 (PE11); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: N-terminal protein myristoylation, cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2459 Blast hits to 2412 proteins in 316 species: Archae - 8; Bacteria - 608; Metazoa - 1; Fungi - 201; Plants - 1615; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    9245038..9247052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127732.2 → NP_179755.1  pectinesterase 11 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179755.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SIJ9
    UniProtKB/TrEMBL
    A0A5S9WZZ1, A0A654EUX2
    Conserved Domains (1) summary
    PLN02432
    Location:47 → 333
    PLN02432; putative pectinesterase

  2. NM_001335771.1 → NP_001324138.1  pectinesterase 11 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W118, A0A1P8AZ45, A0A384LB06, A0A5S9WZZ1, A0A654EUX2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SIJ9.1

Gene LinkOut

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