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LEA dehydrin LEA [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816688, updated on 18-Sep-2024

Summary

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Official Symbol
LEA
Official Full Name
dehydrin LEA
Primary source
TAIR:AT2G21490
Locus tag
AT2G21490
See related
Araport:AT2G21490
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
dehydrin LEA; F3K23.25; F3K23_25
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Genomic context

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See LEA in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (9205990..9207125, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene SUMO-activating enzyme 2 Neighboring gene Malectin/receptor-like protein kinase family protein Neighboring gene RING/U-box superfamily protein Neighboring gene DNAJ heat shock N-terminal domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The ubiquitous distribution of late embryogenesis abundant proteins across cell compartments in Arabidopsis offers tailored protection against abiotic stress. Candat A, et al. Plant Cell, 2014 Jul. PMID 25005920, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_127721.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
dehydrin LEA
NP_179744.1
  • dehydrin LEA (LEA); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: Dehydrin family protein (TAIR:AT4G39130.1); Has 1372 Blast hits to 1173 proteins in 160 species: Archae - 0; Bacteria - 7; Metazoa - 17; Fungi - 21; Plants - 1314; Viruses - 2; Other Eukaryotes - 11 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    9205990..9207125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127721.4 → NP_179744.1  dehydrin LEA [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179744.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q42254, Q8L9Q5, Q96261
    UniProtKB/TrEMBL
    A0A178VQ66, A0A5S9X028
    Conserved Domains (1) summary
    pfam00257
    Location:25 → 180
    Dehydrin
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q96261.1

Gene LinkOut

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