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pEARLI4 phospholipase-like protein (PEARLI 4) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816630, updated on 18-Sep-2024

Summary

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Official Symbol
pEARLI4
Official Full Name
phospholipase-like protein (PEARLI 4) family protein
Primary source
TAIR:AT2G20960
Locus tag
AT2G20960
See related
Araport:AT2G20960
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F26H11.28; F26H11_28
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Genomic context

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See pEARLI4 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Sequence:
Chromosome: 2; NC_003071.7 (9006610..9009794)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene SNARE-like superfamily protein Neighboring gene transmembrane protein, putative (DUF1279) Neighboring gene phospholipase-like protein (PEARLI 4) family protein Neighboring gene lipid-binding protein Neighboring gene minichromosome maintenance 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001335730.1
NM_127665.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
phospholipase-like protein (PEARLI 4) family protein
NP_179692.1
  • pEARLI4; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT4G38560.1); Has 15842 Blast hits to 10281 proteins in 873 species: Archae - 33; Bacteria - 1976; Metazoa - 6640; Fungi - 3309; Plants - 1166; Viruses - 359; Other Eukaryotes - 2359 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    9006610..9009794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001335728.1 → NP_001323931.1  phospholipase-like protein (PEARLI 4) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VXB3, A0A1P8AYH5

  2. NM_001335729.1 → NP_001323932.1  phospholipase-like protein (PEARLI 4) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VXB3, A0A1P8AYN4

  3. NM_127665.3 → NP_179692.1  phospholipase-like protein (PEARLI 4) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179692.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VXB3, Q9SKR5
    Conserved Domains (2) summary
    pfam05278
    Location:435 → 745
    PEARLI-4; Arabidopsis phospholipase-like protein (PEARLI 4)
    pfam08618
    Location:175 → 302
    Opi1; Transcription factor Opi1

  4. NM_001335730.1 → NP_001323930.1  phospholipase-like protein (PEARLI 4) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VXB3, Q9SKR5
Nucleotide Protein
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