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SCAMP3 Secretory carrier membrane protein (SCAMP) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816617, updated on 18-Sep-2024

Summary

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Official Symbol
SCAMP3
Official Full Name
Secretory carrier membrane protein (SCAMP) family protein
Primary source
TAIR:AT2G20840
Locus tag
AT2G20840
See related
Araport:AT2G20840
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtSCAMP3; F5H14.19; F5H14_19; Secretory carrier membrane protein 3
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Genomic context

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See SCAMP3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Sequence:
Chromosome: 2; NC_003071.7 (8971696..8974555, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene folic acid binding / transferase Neighboring gene uncharacterized protein Neighboring gene STRUBBELIG-receptor family 1 Neighboring gene lipoic acid synthase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Nühse TS, et al. Mol Cell Proteomics, 2003 Nov. PMID 14506206
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_127653.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane HDA PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Secretory carrier membrane protein (SCAMP) family protein
NP_179680.1
  • Secretory carrier membrane protein (SCAMP) family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G03550.1); Has 686 Blast hits to 684 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 14; Plants - 230; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    8971696..8974555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001335712.1 → NP_001323533.1  Secretory carrier membrane protein (SCAMP) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSQ3, A0A1P8AXH0
    Conserved Domains (2) summary
    pfam03879
    Location:9 → 38
    Cgr1; Cgr1 family
    pfam04144
    Location:48 → 220
    SCAMP; SCAMP family

  2. NM_001335711.1 → NP_001323534.1  Secretory carrier membrane protein (SCAMP) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSQ3, A0A1P8AXH0
    Conserved Domains (2) summary
    pfam03879
    Location:9 → 38
    Cgr1; Cgr1 family
    pfam04144
    Location:48 → 220
    SCAMP; SCAMP family

  3. NM_127653.5 → NP_179680.1  Secretory carrier membrane protein (SCAMP) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179680.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SKT3
    UniProtKB/TrEMBL
    A0A178VSQ3, A0A5S9WZY0, A0A654EUM0
    Conserved Domains (2) summary
    pfam03879
    Location:52 → 81
    Cgr1; Cgr1 family
    pfam04144
    Location:91 → 263
    SCAMP; SCAMP family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SKT3.1

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