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CAAX amino terminal protease family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816602, updated on 18-Sep-2024

Summary

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Official Full Name
CAAX amino terminal protease family protein
Primary source
TAIR:AT2G20725
Locus tag
AT2G20725
See related
Araport:AT2G20725
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F5H14.3; F5H14_3
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Sequence:
Chromosome: 2; NC_003071.7 (8933317..8935496, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene Tetraspanin family protein Neighboring gene expansin B1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_127637.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in CAAX-box protein processing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
CAAX amino terminal protease family protein
NP_565483.1
  • CAAX amino terminal protease family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT1G14270.1); Has 2599 Blast hits to 2599 proteins in 824 species: Archae - 26; Bacteria - 2240; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    8933317..8935496 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127637.5 → NP_565483.1  CAAX amino terminal protease family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565483.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VTV5, A0A5S9WZR0, Q94K61
    Conserved Domains (1) summary
    pfam02517
    Location:213 → 296
    Abi; CAAX protease self-immunity
Nucleotide Protein
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