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hypothetical protein (DUF626) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816588, updated on 18-Sep-2024

Summary

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Official Full Name
hypothetical protein (DUF626)
Primary source
TAIR:AT2G20620
Locus tag
AT2G20620
See related
Araport:AT2G20620
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F23N11.6; F23N11_6
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Genomic context

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Location:
chromosome: 2
Exon count:
6
Sequence:
Chromosome: 2; NC_003071.7 (8891920..8893244, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Plant thionin family protein Neighboring gene Plant thionin family protein Neighboring gene ncRNA Neighboring gene hypothetical protein (DUF626) Neighboring gene PP2C induced by AVRRPM1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_127625.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
hypothetical protein (DUF626)
NP_179653.1
  • Protein of unknown function (DUF626); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT4G29550.1); Has 165 Blast hits to 165 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    8891920..8893244 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127625.2 → NP_179653.1  hypothetical protein (DUF626) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179653.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q84X35, Q84X36, Q9SIU9
    UniProtKB/TrEMBL
    A0A5S9WZM5, A0A654EUM2
    Conserved Domains (1) summary
    pfam04776
    Location:168 → 277
    DUF626; Protein of unknown function (DUF626)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SIU9.1

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