U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DENN (AEX-3) domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816551, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
DENN (AEX-3) domain-containing protein
Primary source
TAIR:AT2G20320
Locus tag
AT2G20320
See related
Araport:AT2G20320
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F11A3.13; F11A3_13
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
19
Sequence:
Chromosome: 2; NC_003071.7 (8766486..8772668)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene RPM1 interacting protein 13 Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene Integrase-type DNA-binding superfamily protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

NM_001335675.1
NM_127591.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
DENN (AEX-3) domain-containing protein
NP_179622.5
  • DENN (AEX-3) domain-containing protein; CONTAINS InterPro DOMAIN/s: uDENN (InterPro:IPR005113), dDENN (InterPro:IPR005112), DENN (InterPro:IPR001194); BEST Arabidopsis thaliana protein match is: DENN (AEX-3) domain-containing protein (TAIR:AT5G35560.1); Has 1567 Blast hits to 1546 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 1072; Fungi - 78; Plants - 117; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    8766486..8772668
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127591.6 → NP_179622.5  DENN (AEX-3) domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179622.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WZH8, A0A7G2E9T0, F4IUH2
    Conserved Domains (3) summary
    smart00801
    Location:974 → 1020
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:730 → 901
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    pfam03456
    Location:399 → 475
    uDENN; uDENN domain

  2. NM_001335675.1 → NP_001324599.1  DENN (AEX-3) domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WZH8, A0A7G2E9T0, F4IUH2
    Conserved Domains (3) summary
    smart00801
    Location:974 → 1020
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:730 → 901
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    pfam03456
    Location:399 → 475
    uDENN; uDENN domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools