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transcription repressor [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816504, updated on 18-Sep-2024

Summary

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Official Full Name
transcription repressor
Primary source
TAIR:AT2G19850
Locus tag
AT2G19850
See related
Araport:AT2G19850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F6F22.12; F6F22_12
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (8568569..8569890)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene SNF7 family protein Neighboring gene pseudo Neighboring gene hexokinase 2 Neighboring gene tRNA/rRNA methyltransferase (SpoU) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Markers

NM_001161052.2
NM_127543.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
transcription repressor
NP_001154524.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54730.4); Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
NP_179575.4
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54730.1); Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    8568569..8569890
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127543.4 → NP_179575.4  transcription repressor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179575.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XQC4, F4ITH5

  2. NM_001161052.2 → NP_001154524.1  transcription repressor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154524.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4ITH6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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