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LBD9 LOB domain-containing protein 9 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816501, updated on 18-Sep-2024

Summary

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Official Symbol
LBD9
Official Full Name
LOB domain-containing protein 9
Primary source
TAIR:AT2G19820
Locus tag
AT2G19820
See related
Araport:AT2G19820
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F6F22.15; F6F22_15; LOB domain-containing protein 9
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Genomic context

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See LBD9 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (8553543..8554040, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene CCCH-type zinc finger family protein Neighboring gene pseudo Neighboring gene SNF7 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
LOB domain-containing protein 9
NP_179572.1
  • LOB domain-containing protein 9 (LBD9); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 5 (TAIR:AT1G36000.1); Has 821 Blast hits to 816 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 821; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    8553543..8554040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127540.4 → NP_179572.1  LOB domain-containing protein 9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179572.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B7XG89, O82198
    UniProtKB/TrEMBL
    A0A5S9WZE8, A0A654EVU6
    Conserved Domains (1) summary
    pfam03195
    Location:12 → 107
    LOB; Lateral organ boundaries (LOB) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O82198.1

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